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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5848709_5853100_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5848709 - 5853100

Intron Length:

4392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCACA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

CTTACAGTAAAT

Flanking Amino Acid:

LIQFFKAEMAAYRLYTVVPR

Intron Amino Acid Position:

691

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.3

37.4

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

84.8

0.78

0.7

77.7

36.7

Minor 5ss

45.8

-0.4

2.5

58.4

45.9

Minor BPS

46.6

-0.1

2.3

71.28

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286