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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5856278_5860326_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5856278 - 5860326

Intron Length:

4049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTGTTCTTATTT

Flanking Amino Acid:

IVNSYGADALRLYLINSPVV

Intron Amino Acid Position:

601

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.9

0.7

88.2

28.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

63.1

0.49

1.6

75.91

41.4

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286