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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5883296_5884392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5883296 - 5884392

Intron Length:

1097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TAATCTGTTACC

Flanking Amino Acid:

VTDFAGQYVKDADKNIIKLL

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.2

76.2

39.9

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

80.9

0.69

0.8

73.3

37.2

Minor 5ss

29.8

-2.3

3.1

41.5

44.9

Minor BPS

48.2

-0.1

2.3

63.96

41.7

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286