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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5895491_5898189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5895491 - 5898189

Intron Length:

2699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTATA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTGTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTGACTTTATCT

Flanking Amino Acid:

SNFESHQNYKDVQDPSVIVS

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.2

87.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

63.1

0.3

1.1

63.6

37.2

Minor 5ss

34.7

-1.7

2.7

42.8

Minor BPS

64.8

0.54

1.6

80.4

41.7

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286