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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5911959_5912442_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5911959 - 5912442

Intron Length:

484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTGTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAA

U12 Branch Point Sequence:

ATTTAGTTAAGA

Flanking Amino Acid:

ECLKQSKNRPRFNFYDGPPF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

25.3

Major BPS

64.3

0.36

1.2

55.7

41.6

Major PPT

0.79

0.9

76.9

42.1

Minor 5ss

-1.3

3.1

51.9

44.9

Minor BPS

49.3

-0

2.4

70.63

41.5

Associated Gene:

Gene:

IARS1

Ensembl Gene ID:

ENSAPLG00000005750

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006022

5822276 - 5912561

90286