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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5961395_5961717_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5961395 - 5961717

Intron Length:

323

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TAAATATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTCTCATAATA

Flanking Amino Acid:

WEDRRRLLLEECRKKHKDAR

Intron Amino Acid Position:

1172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.6

12.4

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

74.7

0.56

70.6

Minor 5ss

36.2

-1.6

2.9

50.6

45.9

Minor BPS

58.2

0.26

1.6

69.2

37.3

Associated Gene:

Gene:

NOL8

Ensembl Gene ID:

ENSAPLG00000005526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005742

5961341 - 5975455

14115