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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5962484_5962916_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5962484 - 5962916

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

ACTTTTATGACA

Flanking Amino Acid:

EATESERDKEMFSSLPQAVS

Intron Amino Acid Position:

1120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

80.2

34.4

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.7

0.9

73.6

41.7

Minor 5ss

34.9

-1.7

55.2

42.1

Minor BPS

53.4

0.1

1.6

64.5

35.8

Associated Gene:

Gene:

NOL8

Ensembl Gene ID:

ENSAPLG00000005526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005742

5961341 - 5975455

14115