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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5963047_5964957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5963047 - 5964957

Intron Length:

1911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTACTACTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

GGTGAGTTAACT

Flanking Amino Acid:

DDVDQSHVKEEPYVIETIKP

Intron Amino Acid Position:

1077

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

70.7

33.2

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

70.4

0.46

0.9

62.7

38.2

Minor 5ss

30.8

-2.2

3.3

45.5

Minor BPS

48.5

-0

2.3

70.57

45.7

Associated Gene:

Gene:

NOL8

Ensembl Gene ID:

ENSAPLG00000005526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005742

5961341 - 5975455

14115