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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5966069_5967507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5966069 - 5967507

Intron Length:

1439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTATGGGCC

5'SS Class:

major

3'SS Sequence:

TCTATTATTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

TTTTCCCCATTC

Flanking Amino Acid:

TKMATNAKKFKDVNALRYDP

Intron Amino Acid Position:

956

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

62.7

37.9

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

78.7

0.65

0.8

73.4

35.7

Minor 5ss

38.3

-1.3

3.5

50.5

40.6

Minor BPS

49.7

-0

2.1

71.53

39.8

Associated Gene:

Gene:

NOL8

Ensembl Gene ID:

ENSAPLG00000005526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005742

5961341 - 5975455

14115