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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5973735_5974022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5973735 - 5974022

Intron Length:

288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATCTTTTTACAG

Flanking Amino Acid:

VELAKESFLHRLAMEREEAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.2

0.68

75.6

38.3

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

48.5

-0.2

1.7

53.79

41.8

Associated Gene:

Gene:

NOL8

Ensembl Gene ID:

ENSAPLG00000005526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005742

5961341 - 5975455

14115