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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5979326_5979670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5979326 - 5979670

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTATAACA

Flanking Amino Acid:

TSHSKKTLEKNENRTVQKHR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

84.6

33.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.79

0.9

82.2

32.9

Minor 5ss

-0.3

2.9

67.1

37.8

Minor BPS

71.5

0.67

1.5

83.69

29.9

Associated Gene:

Gene:

CENPP

Ensembl Gene ID:

ENSAPLG00000004924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046860

5977504 - 6114732

137229

ENSAPLT00000005094

5978275 - 6121250

142976