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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5979760_5982892_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5979760 - 5982892

Intron Length:

3133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGACC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCAATCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AAATTCTAAAAT

Flanking Amino Acid:

QLEFQLLETQNKENVSAVIT

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

72.4

37.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

75.2

0.57

0.9

67.1

38.2

Minor 5ss

33.6

-1.9

3.1

44.3

43.2

Minor BPS

54.2

0.21

1.7

69.59

40.8

Associated Gene:

Gene:

CENPP

Ensembl Gene ID:

ENSAPLG00000004924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046860

5977504 - 6114732

137229

ENSAPLT00000005094

5978275 - 6121250

142976