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Intron Name: Anas_platyrhynchos_platyrhynchos_13_5996876_5997420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5996876 - 5997420

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

TTCTTTCCAATA

Flanking Amino Acid:

SRGIKANAFKKLTNLAYLYL

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

76.8

0.6

0.8

74.3

29.5

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

48.4

-0.1

1.8

63.27

37.8

Associated Gene:

Gene:

OGN

Ensembl Gene ID:

ENSAPLG00000005371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005560

5990718 - 6004690

13973