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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6017619_6018479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6017619 - 6018479

Intron Length:

861

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTTGA

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTAATGAACA

Flanking Amino Acid:

HLYIEDNDIEMINVTLMCPS

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

70.4

36.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

88.9

0.88

0.6

83.7

24.6

Minor 5ss

47.4

-0.3

2.4

57.5

45.2

Minor BPS

60.4

0.32

1.9

79.2

36.1

Associated Gene:

Gene:

OMD

Ensembl Gene ID:

ENSAPLG00000005369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005537

6017092 - 6019435

2344