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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6040438_6042091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6040438 - 6042091

Intron Length:

1654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTA

5'SS Class:

strong_major

3'SS Sequence:

GTACTATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CAATCTTTAATT

Flanking Amino Acid:

EDFNRYKDLQRLGLGNNKIK

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.9

0.8

0.9

80.2

28.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

71.5

0.49

0.9

62.8

43.1

Minor 5ss

40.9

-1

3.2

48.2

Minor BPS

72.8

0.79

1.2

77.68

39.1

Associated Gene:

Gene:

ASPN

Ensembl Gene ID:

ENSAPLG00000005186

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046369

6038620 - 6049239

10620

ENSAPLT00000005375

6038973 - 6051673

12701