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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6112423_6114160_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6112423 - 6114160

Intron Length:

1738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

GGATATGATACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATATGAT

U12 Branch Point Sequence:

TTTCTCTGGATA

Flanking Amino Acid:

YMILRNPKLPGFELMIVWKI

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

65.8

41.7

Major BPS

75.8

0.64

65.8

Major PPT

58.8

0.2

1.1

50.3

46.9

Minor 5ss

29.6

-2.3

3.2

30.1

Minor BPS

59.7

0.3

1.4

72.07

33.3

Associated Gene:

Gene:

CENPP

Ensembl Gene ID:

ENSAPLG00000004924

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046860

5977504 - 6114732

137229

ENSAPLT00000005094

5978275 - 6121250

142976