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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6163225_6163267_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6163225 - 6163267

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGAC

5'SS Class:

strong_major

3'SS Sequence:

GACCAGCCGTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACCAAAC

U12 Branch Point Sequence:

GACGACCAAACC

Flanking Amino Acid:

ICVLYKSPQPRSSRSSPSKN

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

35.6

Major BPS

48.4

-0.1

52.9

28.9

Major PPT

46.1

-0.2

1.1

41.6

38.1

Minor 5ss

29.3

-2.4

3.5

40.3

46.1

Minor BPS

39.9

-0.7

2.1

45.91

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004696

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004824

6163125 - 6163967

843