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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6168663_6168741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6168663 - 6168741

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGTG

5'SS Class:

major

3'SS Sequence:

GCTCTTTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAC

U12 Branch Point Sequence:

CGAGCCTCACGG

Flanking Amino Acid:

RGRAAGQEPAAGGGADTGLP

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

67.1

44.6

Major BPS

54.7

0.12

1.2

59.2

39.1

Major PPT

78.7

0.65

0.8

76.5

32.1

Minor 5ss

30.3

-2.3

3.4

40.1

Minor BPS

38.5

-1

36.66

45.1

Associated Gene:

Gene:

ATRIP

Ensembl Gene ID:

ENSAPLG00000004472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026210

6168362 - 6179739

11378