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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6177836_6179076_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6177836 - 6179076

Intron Length:

1241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAGCA

5'SS Class:

major

3'SS Sequence:

TTATCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CTAATTTTATTT

Flanking Amino Acid:

EVLWLQLEQEVVKALIVMLH

Intron Amino Acid Position:

798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

68.7

36.4

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

86.3

0.82

0.8

81.3

30.4

Minor 5ss

36.3

-1.6

3.3

48.6

47.1

Minor BPS

49.6

0.05

1.6

64.36

40.9

Associated Gene:

Gene:

ATRIP

Ensembl Gene ID:

ENSAPLG00000004472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028250

6168063 - 6179739

11677