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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6189511_6191348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6189511 - 6191348

Intron Length:

1838

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

AATTTTACAAAT

Flanking Amino Acid:

GPPAYHETVAAGAGAPYPIS

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.9

74.9

Major BPS

73.5

0.59

81.3

29.9

Major PPT

92.4

0.95

0.7

88.3

28.9

Minor 5ss

30.1

-2.3

3.2

37.9

46.9

Minor BPS

46.6

-0.1

1.8

38.1

Associated Gene:

Gene:

SHISA5

Ensembl Gene ID:

ENSAPLG00000004471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004582

6189003 - 6204599

15597