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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6191565_6193364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6191565 - 6193364

Intron Length:

1800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CGGTTGTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

CTAACCATATTC

Flanking Amino Acid:

CLYKACRKPRPVVTTTTATT

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.3

69.7

41.3

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

71.2

0.48

65.2

41.1

Minor 5ss

37.9

-1.4

2.6

42.8

36.9

Minor BPS

46.7

-0.2

1.9

56.93

41.6

Associated Gene:

Gene:

SHISA5

Ensembl Gene ID:

ENSAPLG00000004471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004582

6189003 - 6204599

15597