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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6193481_6203299_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6193481 - 6203299

Intron Length:

9819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTCCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTTAC

U12 Branch Point Sequence:

TGAGGCTTACTT

Flanking Amino Acid:

DSEDLSDYGPSFGTLVAIGI

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

49.4

-0

1.3

43.1

41.5

Major PPT

82.8

0.74

0.8

77.3

31.5

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

47.1

-0.1

2.1

64.99

45.8

Associated Gene:

Gene:

SHISA5

Ensembl Gene ID:

ENSAPLG00000004471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004582

6189003 - 6204599

15597