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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6229149_6248760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6229149 - 6248760

Intron Length:

19612

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

TTCTCCTCACCT

Flanking Amino Acid:

DDEEDLLDESDQPQEAVFSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

0.81

0.8

80.4

31.5

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

64.9

0.55

1.9

84.08

42.8

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510