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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6252998_6253695_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6252998 - 6253695

Intron Length:

698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTTAA

U12 Branch Point Sequence:

TTTCTGGTTACA

Flanking Amino Acid:

DAKGKNNIKDEVIELSSGED

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

0.05

1.2

38.3

Major PPT

82.1

0.72

0.9

75.8

38.2

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

41.7

-0.6

2.7

64.02

42.2

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002302

6240204 - 6266448

26245

ENSAPLT00000028759

6228939 - 6266448

37510