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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6253929_6254644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6253929 - 6254644

Intron Length:

716

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTTTCTACTT

Flanking Amino Acid:

QLAHAVKPHQIGGIRFLYDN

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.2

39.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.6

0.78

0.7

77.8

31.1

Minor 5ss

-0.3

3.1

66.9

44.7

Minor BPS

54.5

0.22

1.9

79.49

37.4

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245