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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6255235_6255914_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6255235 - 6255914

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

TATTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

FKVHILNDEHKTTAARAKVV

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.1

34.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.6

0.98

0.6

92.5

25.6

Minor 5ss

34.3

-1.8

3.4

44.2

37.7

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002302

6240204 - 6266448

26245

ENSAPLT00000028759

6228939 - 6266448

37510