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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6257176_6258044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6257176 - 6258044

Intron Length:

869

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

ATCGCCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATCG

Flanking Amino Acid:

LHSLLEGFVQRRGHNVLKVQ

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

38.8

Major BPS

83.9

0.84

73.9

41.3

Major PPT

68.7

0.42

0.9

61.3

34.5

Minor 5ss

29.5

-2.3

2.7

34.5

Minor BPS

73.4

0.6

1.6

79.06

37.8

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245