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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6258223_6258832_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6258223 - 6258832

Intron Length:

610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAG

U12 Branch Point Sequence:

TAAGCGCTACCT

Flanking Amino Acid:

PLKAFCVCCKIWNHPDVLYE

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

52.8

0.07

1.7

63.6

42.5

Major PPT

80.7

0.69

0.8

77.3

31.4

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

41.3

-0.5

2.5

62.56

46.9

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245