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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6259085_6259582_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6259085 - 6259582

Intron Length:

498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

CCACCTGTAATA

Flanking Amino Acid:

RANQVVTYEWAKDILCDYQT

Intron Amino Acid Position:

676

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

72.7

0.51

70.4

36.3

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

46.5

-0.2

52.68

40.3

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245