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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6260118_6261127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6260118 - 6261127

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGCA

5'SS Class:

major

3'SS Sequence:

ATTTCCTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTGTCCTTAATT

Flanking Amino Acid:

HNWVRNINYYRLDGSTSASE

Intron Amino Acid Position:

754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

65.2

34.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.5

0.75

0.7

81.4

29.8

Minor 5ss

29.7

-2.3

3.1

38.1

40.6

Minor BPS

83.3

1.12

1.1

88.76

36.3

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245