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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6261770_6262586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6261770 - 6262586

Intron Length:

817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CTCTTCTCAGTT

Flanking Amino Acid:

DRQISKQGMSDRVVDDLNPV

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

0.52

1.5

79.6

35.6

Major PPT

91.4

0.93

0.6

84.4

30.5

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

49.5

0.04

1.8

67.15

44.4

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245