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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6263721_6263834_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6263721 - 6263834

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGCAC

U12 Branch Point Sequence:

TCCTCTCTCACT

Flanking Amino Acid:

TSIPAFSQRNWRPALKGEDK

Intron Amino Acid Position:

980

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.7

31.8

Major BPS

47.5

-0.1

1.3

39.5

Major PPT

69.1

0.43

0.8

62.8

33.1

Minor 5ss

31.7

-2.1

2.6

35.1

34.5

Minor BPS

49.9

0.08

2.1

71.75

45.6

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245