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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6264612_6265193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6264612 - 6265193

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATGAA

U12 Branch Point Sequence:

AAACCCTGAATG

Flanking Amino Acid:

ESIHIIRGTKGTYIRTSDGR

Intron Amino Acid Position:

1076

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

25.9

Major BPS

49.9

-0

1.2

43.7

39.2

Major PPT

73.8

0.54

0.9

64.4

41.5

Minor 5ss

41.5

-0.9

2.7

53.7

43.5

Minor BPS

54.3

-0

1.5

55.04

39.5

Associated Gene:

Gene:

RAD54L2

Ensembl Gene ID:

ENSAPLG00000002121

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028759

6228939 - 6266448

37510

ENSAPLT00000002302

6240204 - 6266448

26245