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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6272718_6272804_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6272718 - 6272804

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

GGCCGCCCCGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

GGTTCGCTGACG

Flanking Amino Acid:

PLIFGLFTVSSGVFSGSAVC

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

59.1

0.2

0.9

50.2

34.1

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

45.9

-0.4

2.4

57.27

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002688

6270574 - 6276525

5952