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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6274034_6274121_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6274034 - 6274121

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TGGGCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

GCTGATGTATCC

Flanking Amino Acid:

AFVQLGARGKGALMRLVTHS

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

63.2

0.3

1.1

43.1

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

38.7

-0.8

2.2

47.09

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002688

6270574 - 6276525

5952