Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_6292402_6292992_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6292402 - 6292992

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTGTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CTGTACTTAATT

Flanking Amino Acid:

LAYLEKREREGRYKDKGNDR

Intron Amino Acid Position:

1151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.8

43.8

Major BPS

78.2

0.7

77.9

32.1

Major PPT

68.9

0.43

1.1

70.9

38.9

Minor 5ss

-2.2

3.2

46.1

Minor BPS

70.3

0.72

1.5

80.62

41.6

Associated Gene:

Gene:

RBM6

Ensembl Gene ID:

ENSAPLG00000003536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046469

6288383 - 6337817

49435

ENSAPLT00000029019

6288383 - 6337817

49435

ENSAPLT00000003686

6288383 - 6337817

49435