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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6301072_6302017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6301072 - 6302017

Intron Length:

946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGAGAA

5'SS Class:

major

3'SS Sequence:

TCTTCTCTAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGTAT

U12 Branch Point Sequence:

TCTTCTCTAATA

Flanking Amino Acid:

GEDASAEQEFTEAKLEKPEQ

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

65.4

34.3

Major BPS

53.8

0.09

1.6

57.4

49.1

Major PPT

76.9

0.61

0.8

73.8

29.8

Minor 5ss

31.9

-2.1

3.4

43.8

44.6

Minor BPS

66.1

0.5

1.6

75.53

36.4

Associated Gene:

Gene:

RBM6

Ensembl Gene ID:

ENSAPLG00000003536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033819

6292487 - 6337817

45331

ENSAPLT00000029019

6288383 - 6337817

49435

ENSAPLT00000003686

6288383 - 6337817

49435

ENSAPLT00000046469

6288383 - 6337817

49435

ENSAPLT00000037795

6295320 - 6337817

42498