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Intron Name: Anas_platyrhynchos_platyrhynchos_13_632021_632572_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
632021 - 632572

Intron Length:
552

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCAGTCTT

5'SS Class:
strong_major

3'SS Sequence:
GGTCATTTTTCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATTAAC

U12 Branch Point Sequence:
TAGGAATTAACC

Flanking Amino Acid:
ALQAELTEKESSLIDLKEHA

Intron Amino Acid Position:
641

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
1.2
81.8
38.5

Major BPS
73.1
0.57
0.9
73.7
27.1

Major PPT
77.2
0.61
0.9
73.1
41.8

Minor 5ss
35.6
-1.6
3
50.5
45.8

Minor BPS
49.7
-0
1.9
61.93
42.9

Associated Gene:

Gene:
ERC2

Ensembl Gene ID:

Chromosome:
13

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

431216 - 632752
201537