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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6333528_6334387_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6333528 - 6334387

Intron Length:

860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GTGTGAACTCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTTGTGTGAACT

Flanking Amino Acid:

KDSRPYKSLQDQDYRTCPKY

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

52.5

0.06

1.2

47.2

44.3

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

48.6

-0

2.2

72.98

43.9

Associated Gene:

Gene:

RBM6

Ensembl Gene ID:

ENSAPLG00000003536

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033819

6292487 - 6337817

45331

ENSAPLT00000029019

6288383 - 6337817

49435

ENSAPLT00000003686

6288383 - 6337817

49435

ENSAPLT00000046469

6288383 - 6337817

49435

ENSAPLT00000037795

6295320 - 6337817

42498