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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6342947_6343063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6342947 - 6343063

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAC

U12 Branch Point Sequence:

GGGGGGCTAACG

Flanking Amino Acid:

YKSKSSGLFTSPEIEAPYVR

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

51.7

0.04

1.3

55.3

40.3

Major PPT

80.2

0.68

0.9

36.8

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

34.8

-1.2

2.5

37.11

44.8

Associated Gene:

Gene:

MON1A

Ensembl Gene ID:

ENSAPLG00000003867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003973

6341211 - 6343644

2434