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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6343212_6343503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6343212 - 6343503

Intron Length:

292

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCACCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

ATTTCTTCACCC

Flanking Amino Acid:

TGPRENLLAWVTSAFELYIC

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

77.5

0.68

79.6

Major PPT

80.3

0.68

0.8

73.9

35.8

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

58.9

0.26

1.8

72.85

38.3

Associated Gene:

Gene:

MON1A

Ensembl Gene ID:

ENSAPLG00000003867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003973

6341211 - 6343644

2434