Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_6350241_6350314_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6350241 - 6350314

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTGCC

5'SS Class:

major

3'SS Sequence:

CACCCGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCAGCAC

U12 Branch Point Sequence:

CAGCCCAGCACC

Flanking Amino Acid:

EAAGEKTETTVCEGPQLPER

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

68.2

38.6

Major BPS

41.5

-0.5

1.3

37.8

Major PPT

66.1

0.36

0.9

57.7

32.9

Minor 5ss

-1.9

3.4

44.8

43.3

Minor BPS

40.6

-0.7

47.02

41.6

Associated Gene:

Gene:

MST1R

Ensembl Gene ID:

ENSAPLG00000025617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018453

6345736 - 6353898

8163