Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_6351470_6351548_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6351470 - 6351548

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACAACT

5'SS Class:

major

3'SS Sequence:

CATGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

ATGTCCCCACAG

Flanking Amino Acid:

VTHRHQVIGKGHFGSVYHGT

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

74.2

36.1

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

69.3

0.44

0.9

61.6

34.7

Minor 5ss

36.2

-1.6

50.2

45.8

Minor BPS

41.1

-0.8

2.1

48.28

44.6

Associated Gene:

Gene:

MST1R

Ensembl Gene ID:

ENSAPLG00000025617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018453

6345736 - 6353898

8163