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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6372350_6374657_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6372350 - 6374657

Intron Length:

2308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCTCTC

5'SS Class:

major

3'SS Sequence:

TGCTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

CCCTCCTGACGG

Flanking Amino Acid:

ETEMLCSSLKKQMKFLEQQQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

67.3

44.3

Major BPS

68.9

0.47

59.2

39.1

Major PPT

82.6

0.73

0.8

77.1

31.6

Minor 5ss

43.3

-0.7

3.1

42.6

Minor BPS

-0.6

2.1

43.08

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004253

6369942 - 6381279

11338