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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6375473_6376364_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6375473 - 6376364

Intron Length:

892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GGTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCATGCAAACG

Flanking Amino Acid:

QLAVYCVSLKKEYENLKEAR

Intron Amino Acid Position:

124

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

80.6

0.69

0.9

37.2

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

38.2

-1

2.4

47.74

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004253

6369942 - 6381279

11338