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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6380485_6381192_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6380485 - 6381192

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTGATGCTC

5'SS Class:

weak_major

3'SS Sequence:

GGTGAGGAGCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GACCGAC

U12 Branch Point Sequence:

GACCCCGCAGCC

Flanking Amino Acid:

IQPVSFPVAVKKNGSRPGAA

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.8

0.16

1.1

52.2

38.7

Major BPS

43.4

-0.4

1.2

35.8

33.9

Major PPT

42.5

-0.4

1.2

26.4

Minor 5ss

31.8

-2.1

3.4

43.5

39.1

Minor BPS

39.3

-0.8

2.2

46.37

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004100

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004253

6369942 - 6381279

11338