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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6441913_6443055_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6441913 - 6443055

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAT|GCACGTGAG

5'SS Class:

major

3'SS Sequence:

GGGTGGGCTGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

TTTCCCTTGCTT

Flanking Amino Acid:

HPLLPGTQVHSSPLARKVKR

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.3

65.3

43.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

56.4

0.14

1.1

46.5

45.9

Minor 5ss

23.1

-3.1

4.1

34.8

41.9

Minor BPS

48.7

-0

3.5

84.59

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019124

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039321

6440608 - 6445537

4930