Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_13_6559539_6562103_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

6559539 - 6562103

Intron Length:

2565

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

ACGCCTCTCCCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

CTCTCCTTGACG

Flanking Amino Acid:

RSESKDRKLYKFLLLENVVH

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

67.4

0.39

0.9

57.8

37.9

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

73.4

0.59

1.4

70.4

43.3

Associated Gene:

Gene:

IP6K1

Ensembl Gene ID:

ENSAPLG00000008308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008635

6554192 - 6562348

8157