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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6566606_6566688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6566606 - 6566688

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTGTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

GTGCTCACACTT

Flanking Amino Acid:

IFRPCSHKSCKACINQHLMN

Intron Amino Acid Position:

1180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

76.3

0.59

0.9

68.3

37.4

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

40.5

-0.6

1.9

54.93

41.1

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041169

6566506 - 6610001

43496

ENSAPLT00000007811

6566506 - 6610001

43496