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Intron Name: Anas_platyrhynchos_platyrhynchos_13_6566775_6566931_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6566775 - 6566931

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GCCCCCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTCACCACCA

Flanking Amino Acid:

ESKQAAATTLPTSEEDLCPI

Intron Amino Acid Position:

1152

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

66.8

0.38

0.8

57.1

33.4

Minor 5ss

33.5

-1.9

41.5

39.2

Minor BPS

45.9

-0.3

2.3

69.96

41.8

Associated Gene:

Gene:

RNF123

Ensembl Gene ID:

ENSAPLG00000007425

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007811

6566506 - 6610001

43496

ENSAPLT00000041169

6566506 - 6610001

43496